Publications

Solmaz Golmohammadi, Mina Zarei, and Jacopo Grilli, “Modeling Spatial Synchronization of Predator–Prey Oscillations via the XY Model under Demographic Stochasticity and Migration,” Physical Review E 113, 054409 (2026). Read more.

Esmaeil Mahdavi, Philipp Hövel, Mina Zarei, and Farhad Shahbazi, “Time-Delayed Dynamics in Regular Kuramoto Networks with Inertia: Multistability, Traveling Waves, Chimera States, and Transitions to Seizure-Like Activity,” Chaos, Solitons & Fractals 206, 117883 (2026). Read more.

Ali Seif and Mina Zarei, “Synchronization, Collective Oscillations, and Information Flow in Duplex Networks,” arXiv preprint arXiv:2603.00313 (2026). Read more.

Sara Ameli, Esmaeil Mahdavi, Mina Zarei, and Farhad Shahbazi, “Synchronization of the Time-Delayed Kuramoto Model in a Regular Network,” The European Physical Journal Plus 140, 813 (2026). Read more.

Solmaz Golmohammadi, Mina Zarei, and Jacopo Grilli, “The Effect of Demographic Stochasticity on Predator–Prey Oscillations,” The European Physical Journal Plus 140, 781 (2025). Read more.

Ali Seif and Mina Zarei, “Double Hysteresis Loop in Synchronization Transitions of Multiplex Networks: The Role of Frequency Arrangements and Frustration,” Chaos, Solitons & Fractals 196, 116412 (2025). Read more.

Esmaeil Mahdavi, Mina Zarei, and Farhad Shahbazi, “Synchronization of Two Coupled Massive Oscillators in the Time-Delayed Kuramoto Model,” Chaos: An Interdisciplinary Journal of Nonlinear Science 35(1) (2024). Read more.

Esmaeil Mahdavi, Mina Zarei, and Farhad Shahbazi, “Synchronization of Frustrated Phase Oscillators in Small-World Networks,” The European Physical Journal Plus 137, 888 (2022). Read more.

Samira Hossein Ghorban, Fatemeh Baharifar, Bardia Hesam, Mina Zarei, and Hamid Sarbazi Azad, “Linearization Error in Synchronization of Kuramoto Oscillators,” Applied Mathematics and Computation 411, 126464 (2021). Read more.

Abolfazl Ziaeemehr, Mina Zarei, Alireza Valizadeh, and Claudio R. Mirasso, “Frequency-Dependent Organization of the Brain’s Functional Network through Delayed Interactions,” Neural Networks 132, 155–166 (2020). Read more.

Abolfazl Ziaeemehr, Mina Zarei, and Aida Sheshbolouki, “Emergence of Global Synchronization in Directed Excitatory Networks of Type I Neurons,” Scientific Reports 10, 3306 (2020). Read more.

Aida Sheshbolouki, Mina Zarei, and Hamid Sarbazi Azad, “The Role of Leadership in Synchronization of Directed Complex Networks,” Journal of Statistical Mechanics: Theory and Experiment, P10022 (2015). Read more.

Aida Sheshbolouki, Mina Zarei, and Hamid Sarbazi Azad, “Are Feedback Loops Destructive to Synchronization?” Europhysics Letters (EPL) 111, 40010 (2015). Read more.

Mina Zarei, Bianca Sclavi, and Marco Cosentino Lagomarsino, “Gene Silencing and Large-Scale Domain Structure of the Escherichia coli Genome,” Molecular BioSystems 9, 758–767 (2013). Read more.

Vittore Scolari, Mina Zarei, Matteo Osella, and Marco Cosentino Lagomarsino, “NuST: Analysis of the Interplay between Nucleoid Organization and Gene Expression,” Bioinformatics 28 (2012). Read more.

Bruno Bassetti, Mina Zarei, Marco Cosentino Lagomarsino, and Ginestra Bianconi, “Statistical Mechanics of the ‘Chinese Restaurant Process’: Lack of Self-Averaging, Anomalous Finite-Size Effects, and Condensation,” Physical Review E 80, 066118 (2009). Read more.

Mina Zarei and Keivan Aghababaei Samani, “Complex Eigenvectors of Matrices Give Better Insight into Community Structure,” Journal of Statistical Mechanics: Theory and Experiment, P10018 (2009). Read more.

Mina Zarei, Dena Izadi, and Keivan Aghababaei Samani, “Detecting overlapping community structure of networks based on vertex–vertex correlations” Journal of Statistical Mechanics: Theory and Experiment, P11013 (2009). Read more.

Mina Zarei and Keivan Aghababaei Samani, “Eigenvectors of Matrix Complements Reveal Community Structure More Accurately,” Physica A 388, 1721–1730 (2009). Read more.

Keivan Aghababaei Samani and Mina Zarei, “Intertwined Hamiltonians in Two-Dimensional Curved Spaces,” Annals of Physics 316, 466–482 (2005). Read more.